fix: align all API mappings with live Core v2.3.3, close #4-#11

- Remove 72 phantom endpoints from types.ts (non-existent in live API)
- Fix 11 naming drifts (ListSyncResources→ListResourceSyncs, RunStackPull→PullStack, etc.)
- Add missing execute ops: pull_stack, deploy_stack_service (RunStackService), run_sync
- Remove phantom resource types: execution, access_request, terminal, alert
- Add komodo_copy tool (11 resource types) and komodo_rename tool (12 types)
- Add 14 new list_detail types (swarm_*, config, extra_args, etc.)
- Fix komodo-client.ts: fallback to KOMODO_INIT_ADMIN_USERNAME/PASSWORD env vars
- Rewrite references/api.md to match actual OpenAPI v2.3.3 spec
- Remove terminal from test script RESOURCE_DEFS (no longer valid resource type)

src/tools/rename.ts

@@ -0,0 +1,51 @@
+import { z } from "zod";
+import { KomodoClient } from "../komodo-client.js";
+import { RENAME_REQUEST_MAP } from "../types.js";
+
+const RenameableType = z.enum([
+  "stack", "build", "server", "deployment", "procedure",
+  "alerter", "action", "repo", "builder", "swarm", "tag", "user_group",
+]);
+
+export const renameInputSchema = {
+  resource_type: RenameableType.describe(
+    "Resource type to rename (stack, build, server, deployment, procedure, alerter, action, repo, builder, swarm, tag, user_group)",
+  ),
+  id: z.string().describe("Resource ID or name to rename"),
+  name: z.string().describe("New name for the resource"),
+};
+
+export async function handleRename(
+  args: {
+    resource_type: z.infer<typeof RenameableType>;
+    id: string;
+    name: string;
+  },
+  client: KomodoClient,
+): Promise<{ content: { type: "text"; text: string }[] }> {
+  const { resource_type, id, name } = args;
+
+  const requestName = RENAME_REQUEST_MAP[resource_type];
+  if (!requestName) {
+    throw new Error(
+      `No RENAME endpoint available for resource type: ${resource_type}`,
+    );
+  }
+
+  const params: Record<string, unknown> = { id, name };
+  if (resource_type === "tag") {
+    params.tag = id;
+    delete params.id;
+  }
+
+  const result = await client.rpc("write", requestName, params);
+
+  return {
+    content: [
+      {
+        type: "text",
+        text: JSON.stringify(result, null, 2),
+      },
+    ],
+  };
+}