feat: add multi-project support (#110)

* feat: Implement project management store with project path validation and synchronization

- Added `useProjectsStore` for managing projects, including adding, removing, renaming, and validating project paths.
- Implemented persistence for projects and active project ID using safe storage.
- Introduced synchronization from desktop settings to keep project data consistent.
- Enhanced session store to manage sessions by directory and added new methods for session management.
- Updated todo store to fetch session todos based on the directory context.
- Refactored server code to validate and resolve project directories for various API endpoints.
- Added project entry validation and sanitization to ensure data integrity.

* feat(settings): migrate legacy project settings and update settings loading logic

* feat: enhance project management with directory-aware settings and improved agent/command source handling

* feat: enhance session and project management with directory-aware settings and improved configuration refresh logic

* feat: enhance project management with worktree manager integration and project directory resolution

* feat: enhance agent groups store with project directory resolution and loading logic

* feat: add heartbeat management and global wrapping for SSE blocks in agent and chat providers

* feat: refactor command and project handling in useCommandsStore

- Replaced useDirectoryStore with useProjectsStore to manage project paths.
- Introduced getRequestDirectory function to determine the active project directory.
- Updated command fetching to respect project-level scoping.
- Enhanced error handling and logging for command configuration fetching.
- Improved command configuration saving and updating to utilize project directory context.

feat: enhance project path normalization in useProjectsStore

- Added resolveTildePath function to expand paths starting with ~.
- Updated normalizeProjectPath to utilize home directory for path expansion.

fix: update permission handling in useSessionStore

- Changed Permission type to PermissionRequest for clarity.
- Updated respondToPermission method to use requestId instead of permissionId.

refactor: improve permission utilities

- Introduced types for PermissionAction and PermissionRule.
- Enhanced getAgentDefinition and resolveConfigStore functions for better type safety.
- Added resolvePermissionAction to streamline permission resolution logic.

feat: add agent configuration retrieval endpoint

- Implemented new API endpoint to fetch agent configuration based on project directory.
- Enhanced getAgentPermissionSource to prioritize project-level permissions.

chore: update SDK version in package.json files

- Bumped @opencode-ai/sdk version to ^1.1.1 across all relevant package.json files.

refactor: streamline bridge message handling

- Updated handleBridgeMessage to accept directory parameter for agent and command requests.
- Improved local API request handling to extract directory from query parameters and headers.

feat: enhance project configuration management

- Added functions to retrieve and merge project configuration paths.
- Improved handling of existing project configuration files for agents and commands.

* feat: enhance VSCode integration and session management

- Added support for a sticky sidebar header background in light and dark themes.
- Introduced functions to read VSCode workspace directory and check if running in VSCode.
- Implemented detailed logging for session loading and creation processes.
- Enhanced session filtering based on directory structure and canonical paths.
- Added a new method to reorder projects and prevent modifications in VSCode workspace.
- Improved error handling and logging for app initialization and markdown file parsing.
- Updated API checks and health checks to ensure readiness before proceeding.
- Refactored code for better readability and maintainability across various modules.

* feat: improve agent and branch selection logic, enhance session management, and update multi-run creation response

* feat: add worktree management actions in agent group detail and sidebar, including delete and keep only options

* fix(ui): share IME guard and cover multi-run

* fix(session): reduce maximum visible sessions in group from 7 to 5

packages/desktop/src-tauri/Cargo.lock

@@ -2146,6 +2146,17 @@ dependencies = [
  "thiserror 1.0.69",
 ]
 
+[[package]]
+name = "json5"
+version = "0.4.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "96b0db21af676c1ce64250b5f40f3ce2cf27e4e47cb91ed91eb6fe9350b430c1"
+dependencies = [
+ "pest",
+ "pest_derive",
+ "serde",
+]
+
 [[package]]
 name = "jsonptr"
 version = "0.6.3"
@@ -2856,6 +2867,7 @@ dependencies = [
  "dirs 5.0.1",
  "fastrand",
  "futures-util",
+ "json5",
  "log",
  "nix 0.28.0",
  "objc",
@@ -2993,6 +3005,49 @@ version = "2.3.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "9b4f627cb1b25917193a259e49bdad08f671f8d9708acfd5fe0a8c1455d87220"
 
+[[package]]
+name = "pest"
+version = "2.8.5"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "2c9eb05c21a464ea704b53158d358a31e6425db2f63a1a7312268b05fe2b75f7"
+dependencies = [
+ "memchr",
+ "ucd-trie",
+]
+
+[[package]]
+name = "pest_derive"
+version = "2.8.5"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "68f9dbced329c441fa79d80472764b1a2c7e57123553b8519b36663a2fb234ed"
+dependencies = [
+ "pest",
+ "pest_generator",
+]
+
+[[package]]
+name = "pest_generator"
+version = "2.8.5"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "3bb96d5051a78f44f43c8f712d8e810adb0ebf923fc9ed2655a7f66f63ba8ee5"
+dependencies = [
+ "pest",
+ "pest_meta",
+ "proc-macro2",
+ "quote",
+ "syn 2.0.110",
+]
+
+[[package]]
+name = "pest_meta"
+version = "2.8.5"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "602113b5b5e8621770cfd490cfd90b9f84ab29bd2b0e49ad83eb6d186cef2365"
+dependencies = [
+ "pest",
+ "sha2",
+]
+
 [[package]]
 name = "phf"
 version = "0.8.0"
@@ -5303,6 +5358,12 @@ version = "1.19.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "562d481066bde0658276a35467c4af00bdc6ee726305698a55b86e61d7ad82bb"
 
+[[package]]
+name = "ucd-trie"
+version = "0.1.7"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "2896d95c02a80c6d6a5d6e953d479f5ddf2dfdb6a244441010e373ac0fb88971"
+
 [[package]]
 name = "uds_windows"
 version = "1.1.0"